Best to test as you go. You just have to hope the creator was consistent. Of great help would be a volt/ohm meter(about $10 for a cheapie, good enough for lots of train jobs), or at least test light, or even lighted/operating stock (Cars! Id avoid using a modern loco, but maybe a conventional one). You don't have turnouts, but if you did, or it had buildings or lights, wires might be there. Educated guesses are a must. Start by choosing the one set of power wires thicker than all the others, and connect the variable side of the Z to the MTH board with it. If no "biggest" wires exist, look for a doubled up pair(4), or use a pair at least equal to the largest of the remaining wires. Tape off and/or separate all other loose ends, and look close, making sure all track is normal track(no special operating sections with extra rails or wires). Take ONE wire set , black/red from any known track feed and connect to the MTH board. Place your test equipment on the rails nearest to the feed and attempt to power up (a lighted car "shines" for tests like this). Hopefully its successful and the Z breaker doesn't trip. If it trips this may be difficult(and/or wires are still crossed). Assuming its OK at this point, move the testing equip. slowly around the track looking for power loss. Loss of power in one spot only may just be "block wiring", knowing/finding if blocks exist at this point helps some. If you have track power now, even if its one piece of track, power down. Now add ONE more set of wires to the mth board. Power up again, check breaker, and/or track again, also quickly check for uncoupling on the newly wired in track, just incase you missed a special track(hidden electro magnet track, if you managed to wire the control leads to track power, leaving an electromagnet engaged too long could make it overheat.) Check to see if any dead tracks came to life too. The other terminal strip can have the same logic process applied to it. Why so many feeds if one will work? More feeds helps make power delivery more consistent, less slow downs from being far from the original feed. If any wires newly connected cause a breaker to trip, disconnect till the reason can be explored.
If you find wires going to nowhere today, separate and tape um till you're ready to explore.Get the basic track going first.