I did not treat Westcott's book as a recipe, but rather as a source for good ideas. The two primary ones I used were
1) Adding a 1 x 2 flange to a standard 1 x 4 makes for a very strong girder, capable of spanning long distances. This minimizes the number of vertical legs, and thereby provides a cleaner look, as well as ready access underneath (SkyHookDepot's point)
2) Leaving the cross members open from underneath, allows ready and continual access to risers so you can put in whatever scenery and/or track contours you want.
On my layout, the longitudinal members are L girders, made of two 1 x 4 boards screwed together, and a 1 x 3 flange at the lower edge. The flange makes them look like an "L" in cross section (Westcott's name, not mine) They are installed with the short leg of the "L" down, and the short leg facing inward.
The cross members are single thickness 1 x 4 boards, with the flange both glued and screwed edge on into the board. Thus their width is still the same as a nominal 1 x 4. These are mounted with the short leg of the "L" up, and they rest on the flange on the long stringers. They are screwed in place from the bottom, and the edge. Thus the flange on the cross members are flush the top of the bench. You can now do anything you want. For the flat areas (yards, etc) simply screw through the bottom of the cross member flange into the plywood sheet. For risers. screw them to the opposite side of the joists. This has proven, for me, to be structurally stiff system that could easily accommodate all my layout changes
Incidentally, the spans you see on either side are about 12 feet long. The far span is about five feet
I have a similar setup where I used knee bracing along the wall tied directly into the house structure to support the L-girder. No vertical legs at all. I try to find a photo.
John, I found a few photos that might interest you, since you are doing similar work. There is no question in my mind that LG is the strongest, most dynamic and flexible construction system available.