If you're feeling a change in resistance manually rotating the flywheel, you can stop right there. You need to solve that first!
I agree. The next question is how? I can only reply from my experiences so here goes.... Turn the fly-Wheel by hand until it binds or a change in resistance.. Check out the side rod connections on each driver, The side rod should have just a slight amount of movement where the bolt goes through to attach it to the driver.. Not very much but some. If there's no movement this could led to the jerky operation at slow speeds... Just loosing off the bolt and tightening it up again may help...
Lube the side rods... I use a small amount of 3 in 1 oil applied with a tooth pick on each eccentric crank connections and on the piston. And just about everything else in the running gear.
I don't think this is an electrical problem. The fire box glow didn't flicker ot dim so I think the engine is picking up power.
I understand this is a used engine so it should be broken in with lots of running so there's no use of running the crap out of the engine.... BTW... This is a really neat engine I hope you get it fixed.