Four of the side windows(2 per side) have raised locking wedges.
The secret to getting these apart is to squeeze the windows in from the bottom or sides instead of trying to reach over the top... hold the car in front of you with the side windows facing to your left & right between your hands.
Press in on the "notched" rear windows with both index fingers using a pushing up motion at the same time to "unlock" the raised tabs from the windows. Switch to the front windows and do the same. Repeat on back windows again... usually by this time you have opened up the roof enough to get a grip on the roof panel and raise it straight up & out of the car.
Don't mar the finish by using wedges or screwdrivers to pry the roof up - it just isn't necessary.
On the chance you do have an early Milwaukee car, turn it upside down and check for 6 white tabs/nubs protruding through the slots in the floor. If these are present, you must take one more step and remove those nubs with a hobby knife, as they are actually part of the roof casting. This "feature" was discontinued quickly when it was determined the window nubs/tabs alone were enough(or a service station went to change a bulb on the first one to blow out!).