Deuce- With tubular track the paper insulators between the center rail and the ties can sometimes fall out or get damaged. I would inspect each piece to see if that is the problem. If you are taking it apart you can test the track with a multi-meter set to Ohms (continuity). Test from the center rail to either outside rail. If the meter beeps or goes to 0 ohm then you found the cause.
I have replaced many of these with some thin card stock. Just lift the rail and cut the piece to fit.
The paper under an outer rail was added by a previous owner to make a insulated common rail for activating an accessory. I do the same with my tubular track to activate crossing signals. If you want more detail on this I can explain but for now its not an issue, it can be removed if you want.
How many power drops did you run for the tracks? I have a CW-80 and typically I put at least two drops on a oval. It makes a huge difference. I use mine for the Christmas tree layout- 10' oval of Fastrak w/ two power drops, running my Polar Express Berkshire and 4 lighted coaches. It works just fine.
Bob